Link to variant | Link to patients | Location | DNA nomenclature | RNA nomenclature | Protein nomenclature | Predicted severity | Phenotype with null allele | CRIM status | |
---|---|---|---|---|---|---|---|---|---|
Variant info |
exon 11
|
c.1634C>T | r.(1634c>u) | p.(Pro545Leu) | Less severe | Childhood or Adult | Unknown | ||
Variant info |
exon 11
|
c.1636G>C | r.(1636g>c) | p.(Gly546Arg) | Very severe | Unknown (disease-associated) | Unknown | ||
Variant info |
intron 11
|
c.1636+1G>C | r.spl | p.? | Very severe | Unknown (disease-associated) | Unknown | ||
Variant info |
intron 11
|
c.1636+5G>T | r.(spl?) | p.? | Potentially mild | Unknown (disease-associated) | Unknown | ||
Variant info |
intron 11
|
c.1636+5G>A | r.(spl?) | p.? | very severe | Classic infantile | Unknown | ||
Variant info |
intron 11
|
c.1636+5G>C | r.(1636_1637ins957 | p.(Gly546fs*145) | Very severe | Classic infantile | Unknown | ||
Variant info |
intron 11
|
c.1636+43G>T | r.(=) | p.? | Non-pathogenic | Unknown | Positive | ||
Variant info |
intron 11
|
c.1636+117del | r.(=) | p.? | Non-pathogenic | Unknown | Positive | ||
Variant info |
intron 11
|
c.1636+117C>T | r.(=) | p.? | Non-pathogenic | Unknown | Positive | ||
Variant info |
intron 11
|
c.1636+118G>T | r.(=) | p.? | Non-pathogenic | Unknown | Positive | ||
Variant info |
intron 11
|
c.1636+205C>T | r.(=) | p.? | Non-pathogenic | Unknown | Positive | ||
Variant info |
intron 11
|
c.1636+210G>A | r.(=) | p.? | Non-pathogenic | Unknown | Positive | ||
Variant info |
intron 11
|
c.1636+269C>T | r.(=) | p.? | Non-pathogenic | Unknown | Positive | ||
Variant info |
intron 11
|
c.1636+284G>C | r.(=) | p.? | Non-pathogenic | Unknown | Positive | ||
Variant info |
intron 11
|
c.1636+389C>G | r.(=) | p.? | Non-pathogenic | Unknown | Positive | ||
Variant info |
intron 11
|
c.1636+390A>G | r.(=) | p.? | Non-pathogenic | Unknown | Positive | ||
Variant info |
intron 11
|
c.1636+404A>G | r.(=) | p.? | Non-pathogenic | Unknown | Positive | ||
Variant info |
intron 11
|
c.1637-185A>G | r.(=) | p.? | Non-pathogenic | Unknown | Positive | ||
Variant info |
intron 11
|
c.1637-2A>G | r.spl | p.? | Very severe | Classic infantile | Unknown | ||
Variant info |
exon 12
|
c.1642G>T | r.(1642g>u) | p.(Val548Phe) | Unknown | Unknown (disease-associated) | Positive | ||
Variant info |
exon 12
|
c.1645G>A | r.(1645g>a) | p.(Gly549Arg) | Potentially mild | Unknown (disease-associated) | Unknown | ||
Variant info |
exon 12
|
c.1645G>C | r.(1645g>c) | p.(Gly549Arg) | Potentially mild | Unknown (disease-associated) | Positive | ||
Variant info |
exon 12
|
c.1650dup | r.(1650dup) | p.(Thr551Aspfs*85) | Very severe | Classic infantile | Negative | ||
Variant info |
exon 12
|
c.1650del | r.(1650del) | p.(Thr551Profs*27) | very severe | Unknown (disease-associated) | Negative | ||
Variant info |
exon 12
|
c.1654del | r.(1654del) | p.(Leu552Serfs*26) | Very severe | Classic infantile | Negative | ||
Variant info |
exon 12
|
c.1655T>C | r.(1655u>c) | p.(Leu552Pro) | Potentially less severe | Classic infantile | Positive | ||
Variant info |
exon 12
|
c.1657C>T | r.(1657c>u) | p.(Gln553*) | very severe | Classic infantile | Negative | ||
Variant info |
exon 12
|
c.1666A>G | r.(1666a>g) | p.(Thr556Ala) | Unknown | Unknown (disease-associated) | Positive | ||
Variant info |
exon 12
|
c.1669A>T | r.(1669a>u) | p.(Ile557Phe) | Very severe | Classic infantile | Positive | ||
Variant info |
exon 12
|
c.1670T>G | r.(1670u>g) | p.(Ile557Ser) | very severe | Unknown | Unknown | ||
Variant info |
exon 12
|
c.1672T>A | r.(1672u>a) | p.(Cys558Ser) | Potentially less severe | Unknown | Positive | ||
Variant info |
exon 12
|
c.1673G>C | r.(1673g>c) | p.(Cys558Ser) | Potentially less severe | Unknown (disease-associated) | Positive | ||
Variant info |
exon 12
|
c.1681_1699dup | r.(1681_1699dup) | p.(Thr567Lysfs*75) | very severe | Unknown (disease-associated) | Negative | ||
Variant info |
exon 12
|
c.1687C>T | r.(1687c>u) | p.(Gln563*) | Very severe | Classic infantile | Negative | ||
Variant info |
exon 12
|
c.1688A>T | r.(1688a>u) | p.(Gln563Leu) | Potentially less severe | Unknown (disease-associated) | Positive | ||
Variant info |
exon 12
|
c.1694_1697del | r.(1694_1697del) | p.(Leu565Profs*12) | Very severe | Unknown (disease-associated) | Negative | ||
Variant info |
exon 12
|
c.1696T>C | r.(1696u>c) | p.(Ser566Pro) | Potentially less severe | Classic infantile | Positive | ||
Variant info |
exon 12
|
c.1703A>T | r.(1703a>u) | p.(His568Leu) | Less severe | Unknown (disease-associated) | Positive | ||
Variant info |
exon 12
|
c.1704C>G | r.(1704c>g) | p.(His568Gln) | Unknown | Adult | Unknown | ||
Variant info |
exon 12
|
c.1705dup | r.(1705dup) | p.(tyr569Leufs*67) | Very severe | Classic infantile | Negative | ||
Variant info |
exon 12
|
c.1710C>G | r.(1710c>g) | p.(Asn570Lys) | Potentially less severe | Classic infantile | Positive | ||
Variant info |
exon 12
|
c.1716C>G | r.(1716c>g) | p.(His572Gln) | Potentially less severe | Classic infantile | Unknown | ||
Variant info |
exon 12
|
c.1716C>A | r.(1716c>a) | p.(His572Gln) | potentially less severe | Classic infantile | Positive | ||
Variant info |
exon 12
|
c.1717A>C | r.(1717a>c) | p.(Asn573His) | Potentially less severe | Unknown | Positive | ||
Variant info |
exon 12
|
c.1719C>A | r.(1719c>a) | p.(Asn573Lys) | Unknown | Unknown (disease-associated) | Positive | ||
Variant info |
exon 12
|
c.1721T>C | r.(1721u>c) | p.(Leu574Pro) | potentially less severe | Unknown (disease-associated) | Positive | ||
Variant info |
exon 12
|
c.1724A>C | r.(1724a>c) | p.(Tyr575Ser) | Potentially less severe | Unknown (disease-associated) | Positive | ||
Variant info |
exon 12
|
c.1724A>G | r.(1724a>g) | p.(Tyr575Cys) | Potentially less severe | Unknown | Positive | ||
Variant info |
exon 12
|
c.1725C>A | r.(1725c>a) | p.(Tyr575*) | Very severe | Unknown (disease-associated) | Negative | ||
Variant info |
exon 12
|
c.1726G>A | r.1726g>a | p.(Gly576Ser) | Presumably non-pathogenic | Unknown | Unknown | ||
Variant info |
exon 12
|
c.1726G>C | r.(1726g>c) | p.(Gly576Arg) | Potentially less severe | Unknown (disease-associated) | Positive | ||
Variant info |
exon 12
|
c.1727G>A | r.(1727g>a) | p.(Gly576Asp) | Potentially less severe | Unknown | Positive | ||
Variant info |
exon 12
|
c.1735G>A | r.(1735g>a) | p.(Glu579Lys) | Potentially less severe | Classic infantile | Positive | ||
Variant info |
exon 12
|
c.1748C>T | r.(1748c>u) | p.(Ser583Phe) | Potentially less severe | Unknown (disease-associated) | Positive | ||
Variant info |
exon 12
|
c.1753_2799del | r.(1753_2799del) | p.(Arg586_Lys933del) | very severe | Classic infantile | Unknown | ||
Variant info |
exon 12
|
c.1754G>T | r.[(1754g>u), r.(spl?)] | p.[(Arg585Met), p.?] | Less severe | Unknown (disease-associated) | Unknown | ||
Variant info |
exon 12
|
c.1754G>A | r.[(1754g>a), r.(spl?)] | p.[(Arg585Lys), p.?] | Less severe | Childhood or Adult | Unknown | ||
Variant info |
intron 12
|
c.1754+1G>A | r.spl | p.? | Very severe | Classic infantile | Negative | ||
Variant info |
intron 12
|
c.1754+1dup | r.spl | p.? | very severe | Unknown (disease-associated) | Unknown | ||
Variant info |
intron 12
|
c.1754+2T>A | r.spl | p.? | Very severe | Unknown (disease-associated) | Negative | ||
Variant info |
intron 12
|
c.1754+2T>C | r.spl | p.? | very severe | Unknown (disease-associated) | Unknown | ||
Variant info |
intron 12
|
c.1754+12G>A | r.(=) | p.? | Non-pathogenic | Unknown | Positive | ||
Variant info |
intron 12
|
c.1754+100C>T | r.(=) | p.? | Non-pathogenic | Unknown | Positive | ||
Variant info |
intron 12
|
c.1754+104C>G | r.(=) | p.? | Non-pathogenic | Unknown | Positive | ||
Variant info |
intron 12
|
c.1754+144C>T | r.(=) | p.? | Non-pathogenic | Unknown | Positive | ||
Variant info |
intron 12
|
c.1755-186A>G | r.(=) | p.? | Non-pathogenic | Unknown | Positive | ||
Variant info |
intron 12
|
c.1754+16C>T | r.(=) | p.? | Non-pathogenic | Unknown | Positive | ||
Variant info |
intron 12
|
c.1755-1G>A | r.spl | p.? | Very severe | Classic infantile | Unknown | ||
Variant info |
exon 13
|
c.1760T>C | r.(1760u>c) | p.(Leu587Pro) | Unknown | Classic infantile | Positive | ||
Variant info |
exon 13
|
c.1771C>T | r.(1771c>u) | p.(Arg591Trp) | Unknown | Unknown (disease-associated) | Positive | ||
Variant info |
exon 13
|
c.1776del | r.(1776del) | p.(Thr593Hisfs*5) | Very severe | Unknown (disease-associated) | Negative | ||
Variant info |
exon 13
|
c.1780C>T | r.(1780c>u) | p.(Arg594Cys) | Potentially less severe | Unknown (disease-associated) | Positive | ||
Variant info |
exon 13
|
c.1781G>C | r.(1781g>c) | p.(Arg594Pro) | Potentially less severe | Childhood or adult | Positive | ||
Variant info |
exon 13
|
c.1781G>A | r.(1781g>a) | p.(Arg594His) | Potentially less severe | Childhood | Positive | ||
Variant info |
exon 13
|
c.1784C>T | r.(1784c>u) | p.(Pro595Leu) | Potentially less severe | Unknown (disease-associated) | Positive | ||
Variant info |
exon 13
|
c.1796C>A | r.(1796c>a) | p.(Ser599Tyr) | Potentially less severe | Unknown (disease-associated) | Positive | ||
Variant info |
exon 13
|
c.1796C>T | r.(1796c>u) | p.(Ser599Phe) | Less severe | Unknown (disease-associated) | Positive | ||
Variant info |
exon 13
|
c.1798C>T | r.(1798c>u) | p.(Arg600Cys) | Less severe | Classic infantile | Positive | ||
Variant info |
exon 13
|
c.1799G>A | r.(1799g>a) | p.(Arg600His) | Potentially less severe | Classic infantile | Positive | ||
Variant info |
exon 13
|
c.1799G>C | r.(1799g>c) | p.(Arg600Pro) | potentially less severe | Unknown (disease-associated) | Positive | ||
Variant info |
exon 13
|
c.1799G>T | r.(1799g>u) | p.(Arg600Leu) | Potentially less severe | Classic infantile | Positive | ||
Variant info |
exon 13
|
c.1802C>A | r.(1802c>a) | p.(Ser601*) | Very severe | Classic infantile | Negative | ||
Variant info |
exon 13
|
c.1802C>G | r.(1802c>g) | p.(Ser601Trp) | Potentially less severe | Unknown (disease-associated) | Positive | ||
Variant info |
exon 13
|
c.1802C>T | r.(1802c>u) | p.(Ser601Leu) | Potentially less severe | Classic infantile | Positive | ||
Variant info |
exon 13
|
c.1804A>G | r.(1804a>g) | p.(Thr602Ala) | Less severe | Unknown | Positive | ||
Variant info |
exon 13
|
c.1805C>T | r.(1805c>u) | p.(Thr602Ile) | Potentially less severe | Unknown (found only in NBS) | Positive | ||
Variant info |
exon 13
|
c.1814G>A | r.(1814g>a) | p.(Gly605Asp) | Unknown | Unknown (disease-associated) | Positive | ||
Variant info |
exon 13
|
c.1819_1836del | r.(1819_1836del) | p.(Gly607_His612del) | Very severe | Unknown (disease-associated) | Positive | ||
Variant info |
exon 13
|
c.1820G>A | r.(1820g>a) | p.(Gly607Asp) | Potentially less severe | Classic infantile | Positive | ||
Variant info |
exon 13
|
c.1822C>T | r.(1822c>u) | p.(Arg608*) | Very severe | Classic infantile | Negative | ||
Variant info |
exon 13
|
c.1822del | r.(1822del) | p.(Arg608Aspfs*88) | very severe | Unknown (disease-associated) | Negative | ||
Variant info |
exon 13
|
c.1824_1828dup | r.(1824_1828dup) | p.(Ala610Aspfs*88) | Very severe | Classic infantile | Negative | ||
Variant info |
exon 13
|
c.1825T>G | r.(1825u>g) | p.(Tyr609Asp) | Potentially less severe | Unknown (disease-associated) | Positive | ||
Variant info |
exon 13
|
c.1826dup | r.(1826dup) | p.(Tyr609*) | Very severe | Classic infantile | Negative | ||
Variant info |
exon 13
|
c.1827del | r.(1827del) | p.(Tyr609*) | Very severe | Unknown (disease-associated) | Negative | ||
Variant info |
exon 13
|
c.1827C>G | r.(1827c>g) | p.(Tyr609*) | Very severe | Classic infantile | Negative | ||
Variant info |
exon 13
|
c.1829C>T | r.(1829c>u) | p.(Ala610Val) | Less severe | Childhood | Positive | ||
Variant info |
exon 13
|
c.1830C>T | r.(1830c>u) | p.(=) | Non-pathogenic | Unknown | Positive | ||
Variant info |
exon 13
|
c.1832G>A | r.(1832g>a) | p.(Gly611Asp) | Potentially less severe | Unknown (disease-associated) | Positive | ||
Variant info |
exon 13
|
c.1833_1847delinsACGGGGTAT | c.(1833_1847delinsacgggguau) | p.(His612_Asp616delinsArgGlyIle) | Very severe | Classic infantile | Positive |
The Pompe disease GAA variant database represents an effort to collect all known variants in the GAA gene and is maintained and provide by the Pompe center, Erasmus MC. We kindly ask you to reference one of the following articles if you use this database for research purposes: de Faria, DOS, in 't Groen, SLM, Bergsma, AJ, et al. Update of the Pompe variant database for the prediction of clinical phenotypes: Novel disease-associated variants, common sequence variants, and results from newborn screening. Niño, MY, in 't Groen, SLM, Hoogeveen-Westerveld, M, et al. Extension of the Pompe mutation database by linking disease‐associated variants to clinical severity. Human Mutation. 2019; 40: 1954–1967. https://doi.org/10.1002/humu.23854 |
www.pompecenter.nl |
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